Research workbench
AlphaFold monomer V2.0 prediction for putative peptide transport permease protein RV1282C (P9WFZ9)
Analyse AlphaFold monomer V2.0 prediction for putative peptide transport permease… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P9WFZ9
- Type
- protein
- Length
- 291 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4EBE91E6e980d72508555910A99e82A95c46Ff2A
- Molecule
- Putative peptide transport permease protein RV1282C
- UniProt
- P9WFZ9
- Pockets
- 2 · best druggability 0.45
Structure
1 distinct chain · 73% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative peptide transport permease protein RV1282C | protein | 291 | 73% helix, 1% strand | P9WFZ9 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.45 | 0.75 | 25 | empty |
| 2 | 114 | 0.38 | 0.74 | 21 | empty |
Compared structures
- 8J5Q · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-translocation state · an experimental structure of the same protein · chain A against C, TM-score 0.89
- 8J5S · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-catalytic intermediate… · an experimental structure of the same protein · chain A against C, TM-score 0.88
- 8J5R · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the resting state · an experimental structure of the same protein · chain A against C, TM-score 0.88
- 8J5T · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the catalytic intermediate… · an experimental structure of the same protein · chain A against C, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WFZ9
- Elsewhere: UniProt P9WFZ9 · AlphaFold DB P9WFZ9
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