Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized ABC transporter ATP-binding protein RV1281C (P9WQJ5)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized ABC transporter… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P9WQJ5
- Type
- protein
- Length
- 612 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Uncharacterized ABC transporter ATP-binding protein RV1281C
- UniProt
- P9WQJ5
- Pockets
- 8 · best druggability 0.79
Structure
1 distinct chain · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized ABC transporter ATP-binding protein RV1281C | protein | 612 | 38% helix, 24% strand | P9WQJ5 |
Pockets
8 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 176 | 0.79 | 0.95 | 34 | empty |
| 2 | 289 | 0.52 | 0.75 | 54 | empty |
| 3 | 200 | 0.52 | 0.77 | 20 | empty |
| 4 | 193 | 0.52 | 0.78 | 25 | empty |
| 5 | 154 | 0.50 | 0.79 | 20 | empty |
Compared structures
- 8J5Q · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-translocation state · an experimental structure of the same protein · chain A against D, TM-score 0.96
- 8J5R · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the resting state · an experimental structure of the same protein · chain A against D, TM-score 0.95
- 8J5S · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-catalytic intermediate… · an experimental structure of the same protein · chain A against D, TM-score 0.95
- 8J5T · Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the catalytic intermediate… · an experimental structure of the same protein · chain A against D, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WQJ5
- Elsewhere: UniProt P9WQJ5 · AlphaFold DB P9WQJ5
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