Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein VC_1145 (Q9KSW1)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein VC_1145… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9KSW1
- Type
- protein
- Length
- 558 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe0c6c38015669c27FB3C8f83558E6ab9AfEbdB85
- Molecule
- Putative transport protein VC_1145
- UniProt
- Q9KSW1
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 61% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein VC_1145 | protein | 558 | 61% helix, 12% strand | Q9KSW1 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1053 | 0.79 | 0.80 | 101 | empty |
| 2 | 351 | 0.68 | 0.81 | 37 | empty |
| 3 | 86 | 0.55 | 0.85 | 17 | empty |
| 4 | 76 | 0.40 | 0.78 | 16 | empty |
| 5 | 96 | 0.35 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KSW1
- Elsewhere: UniProt Q9KSW1 · AlphaFold DB Q9KSW1
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