Research workbench
AlphaFold monomer V2.0 prediction for putative ligase RV1013 (O05598)
Analyse AlphaFold monomer V2.0 prediction for putative ligase RV1013 (O05598) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O05598
- Type
- protein
- Length
- 544 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Putative ligase RV1013
- UniProt
- O05598
- Pockets
- 3 · best druggability 0.86
Structure
1 distinct chain · 35% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative ligase RV1013 | protein | 544 | 35% helix, 27% strand | O05598 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 976 | 0.86 | 0.87 | 107 | empty |
| 2 | 107 | 0.79 | 0.97 | 28 | empty |
| 3 | 50 | 0.59 | 0.92 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O05598
- Elsewhere: UniProt O05598 · AlphaFold DB O05598
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