Research workbench
AlphaFold monomer V2.0 prediction for putative outer membrane protein NMB0088 (Q9K1M2)
Analyse AlphaFold monomer V2.0 prediction for putative outer membrane protein NMB0088… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9K1M2
- Type
- protein
- Length
- 466 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfB234317515f73C4d96eAfC2eBb80D4fa77E633a
- Molecule
- Putative outer membrane protein NMB0088
- UniProt
- Q9K1M2
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 11% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative outer membrane protein NMB0088 | protein | 466 | 11% helix, 56% strand | Q9K1M2 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 155 | 0.82 | 0.98 | 40 | empty |
| 2 | 128 | 0.80 | 0.97 | 28 | empty |
| 3 | 155 | 0.61 | 0.84 | 28 | empty |
| 4 | 154 | 0.56 | 0.82 | 25 | empty |
| 5 | 200 | 0.46 | 0.75 | 35 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9K1M2
- Elsewhere: UniProt Q9K1M2 · AlphaFold DB Q9K1M2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.