Research workbench
AlphaFold monomer V2.0 prediction for UPF0758 protein PSPTO_0086 (Q88BD1)
Analyse AlphaFold monomer V2.0 prediction for UPF0758 protein PSPTO_0086 (Q88BD1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q88BD1
- Type
- protein
- Length
- 224 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x37980899ba05b13cE955B2984E29ee9e423A1753
- Molecule
- UPF0758 protein PSPTO_0086
- UniProt
- Q88BD1
- Pockets
- 4 · best druggability 0.47
Structure
1 distinct chain · 49% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0758 protein PSPTO_0086 | protein | 224 | 49% helix, 16% strand | Q88BD1 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 191 | 0.47 | 0.75 | 24 | empty |
| 2 | 52 | 0.41 | 0.82 | 12 | empty |
| 3 | 104 | 0.37 | 0.75 | 17 | empty |
| 4 | 50 | 0.26 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q88BD1
- Elsewhere: UniProt Q88BD1 · AlphaFold DB Q88BD1
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