Research workbench
AlphaFold monomer V2.0 prediction for bromodomain-containing protein DDB_G0280777 (Q54UW4)
Analyse AlphaFold monomer V2.0 prediction for bromodomain-containing protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54UW4
- Type
- protein
- Length
- 1,823 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3fd45D5379558509344f5F00BeA37E3fcF852280
- Molecule
- Bromodomain-containing protein DDB_G0280777
- UniProt
- Q54UW4
- Pockets
- 5 · best druggability 0.69
Structure
1 distinct chain · 30% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bromodomain-containing protein DDB_G0280777 | protein | 1823 | 30% helix, 0% strand | Q54UW4 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1078 | 0.69 | 0.74 | 68 | empty |
| 2 | 106 | 0.50 | 0.81 | 20 | empty |
| 3 | 61 | 0.31 | 0.75 | 12 | empty |
| 4 | 63 | 0.28 | 0.73 | 12 | empty |
| 5 | 65 | 0.26 | 0.72 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54UW4
- Elsewhere: UniProt Q54UW4 · AlphaFold DB Q54UW4
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