Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized lipoprotein RT0028 (Q68XX6)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized lipoprotein RT0028… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q68XX6
- Type
- protein
- Length
- 1,154 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Uncharacterized lipoprotein RT0028
- UniProt
- Q68XX6
- Pockets
- 20 · best druggability 0.76
Structure
1 distinct chain · 59% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized lipoprotein RT0028 | protein | 1154 | 59% helix, 9% strand | Q68XX6 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 452 | 0.76 | 0.85 | 54 | empty |
| 2 | 52 | 0.74 | 1.00 | 18 | empty |
| 3 | 524 | 0.66 | 0.77 | 48 | empty |
| 4 | 367 | 0.63 | 0.78 | 32 | empty |
| 5 | 425 | 0.59 | 0.75 | 34 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q68XX6
- Elsewhere: UniProt Q68XX6 · AlphaFold DB Q68XX6
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