Research workbench
AlphaFold monomer V2.0 prediction for putative ABC transporter ATP- binding protein PAM_020 (Q6YRJ4)
Analyse AlphaFold monomer V2.0 prediction for putative ABC transporter ATP- binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6YRJ4
- Type
- protein
- Length
- 588 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Putative ABC transporter ATP-binding protein PAM_020
- UniProt
- Q6YRJ4
- Pockets
- 11 · best druggability 0.75
Structure
1 distinct chain · 42% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative ABC transporter ATP-binding protein PAM_020 | protein | 588 | 42% helix, 21% strand | Q6YRJ4 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 115 | 0.75 | 0.95 | 26 | empty |
| 2 | 894 | 0.72 | 0.77 | 83 | empty |
| 3 | 327 | 0.70 | 0.83 | 28 | empty |
| 4 | 180 | 0.54 | 0.79 | 25 | empty |
| 5 | 230 | 0.54 | 0.77 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6YRJ4
- Elsewhere: UniProt Q6YRJ4 · AlphaFold DB Q6YRJ4
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