Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein YPDSF_0014 (A4TGM8)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein YPDSF_0014… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4TGM8
- Type
- protein
- Length
- 552 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- Putative transport protein YPDSF_0014
- UniProt
- A4TGM8
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 63% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein YPDSF_0014 | protein | 552 | 63% helix, 12% strand | A4TGM8 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1009 | 0.72 | 0.76 | 99 | empty |
| 2 | 140 | 0.66 | 0.88 | 25 | empty |
| 3 | 171 | 0.48 | 0.77 | 32 | empty |
| 4 | 50 | 0.26 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4TGM8
- Elsewhere: UniProt A4TGM8 · AlphaFold DB A4TGM8
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