Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein YPK_0013 (B1JGZ7)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein YPK_0013… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1JGZ7
- Type
- protein
- Length
- 552 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x54FBC17A5C73fF6f44d925D726c013269Fd7F733
- Molecule
- Putative transport protein YPK_0013
- UniProt
- B1JGZ7
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 64% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein YPK_0013 | protein | 552 | 64% helix, 12% strand | B1JGZ7 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 942 | 0.72 | 0.76 | 97 | empty |
| 2 | 138 | 0.62 | 0.86 | 21 | empty |
| 3 | 102 | 0.37 | 0.75 | 12 | empty |
| 4 | 52 | 0.36 | 0.80 | 12 | empty |
| 5 | 55 | 0.32 | 0.76 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1JGZ7
- Elsewhere: UniProt B1JGZ7 · AlphaFold DB B1JGZ7
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