Research workbench
AlphaFold monomer V2.0 prediction for probable exo-1,4-beta- xylosidase xlnd (Q0CMH8)
Analyse AlphaFold monomer V2.0 prediction for probable exo-1,4-beta- xylosidase xlnd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0CMH8
- Type
- protein
- Length
- 793 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC0C15E77571eb492a29A53B44C2DeEE0B49693cb
- Molecule
- Probable exo-1,4-beta-xylosidase xlnd
- UniProt
- Q0CMH8
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 29% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable exo-1,4-beta-xylosidase xlnd | protein | 793 | 29% helix, 19% strand | Q0CMH8 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.72 | 0.99 | 19 | empty |
| 2 | 312 | 0.64 | 0.80 | 37 | empty |
| 3 | 99 | 0.42 | 0.77 | 21 | empty |
| 4 | 62 | 0.29 | 0.74 | 17 | empty |
| 5 | 50 | 0.27 | 0.74 | 14 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0CMH8
- Elsewhere: UniProt Q0CMH8 · AlphaFold DB Q0CMH8
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