Research workbench
AlphaFold monomer V2.0 prediction for probable exo-1,4-beta- xylosidase xlnd (B8MYV0)
Analyse AlphaFold monomer V2.0 prediction for probable exo-1,4-beta- xylosidase xlnd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8MYV0
- Type
- protein
- Length
- 797 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDc7b11bC19E7871dc4cc7f885eEd3e0D4eBdc448
- Molecule
- Probable exo-1,4-beta-xylosidase xlnd
- UniProt
- B8MYV0
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 28% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable exo-1,4-beta-xylosidase xlnd | protein | 797 | 28% helix, 19% strand | B8MYV0 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 378 | 0.72 | 0.83 | 47 | empty |
| 2 | 130 | 0.41 | 0.75 | 21 | empty |
| 3 | 57 | 0.40 | 0.81 | 19 | empty |
| 4 | 50 | 0.33 | 0.78 | 15 | empty |
| 5 | 69 | 0.31 | 0.75 | 17 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8MYV0
- Elsewhere: UniProt B8MYV0 · AlphaFold DB B8MYV0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.