Research workbench
AlphaFold monomer V2.0 prediction for glucuronoxylanase xync (Q45070)
Analyse AlphaFold monomer V2.0 prediction for glucuronoxylanase xync (Q45070) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q45070
- Type
- protein
- Length
- 422 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Glucuronoxylanase xync
- UniProt
- Q45070
- Pockets
- 2 · best druggability 0.33
Structure
1 distinct chain · 26% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucuronoxylanase xync | protein | 422 | 26% helix, 29% strand | Q45070 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.33 | 0.77 | 20 | empty |
| 2 | 60 | 0.30 | 0.74 | 19 | empty |
Compared structures
- 3KL0 · Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 3KL0 · Crystal structure of the glucuronoxylan xylanohydrolase xync from bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 3KL3 · Crystal structure of ligand bound xync · an experimental structure of the same protein · chain A against C, TM-score 0.92
- 3KL3 · Crystal structure of Ligand bound XynC · an experimental structure of the same protein · chain A against C, TM-score 0.92
- 3KL5 · Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate… · an experimental structure of the same protein · chain A against B, TM-score 0.92
- 3KL5 · Structure analysis of a xylanase from glycosyl hydrolase family thirty: carbohydrate… · an experimental structure of the same protein · chain A against B, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q45070
- Elsewhere: UniProt Q45070 · AlphaFold DB Q45070
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