Research workbench
AlphaFold monomer V2.0 prediction for calpain-1 catalytic subunit (P00789)
Analyse AlphaFold monomer V2.0 prediction for calpain-1 catalytic subunit (P00789) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P00789
- Type
- protein
- Length
- 705 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xE56999B39685E9b46FBc6B6E6714a8DC44B1B732
- Molecule
- Calpain-1 catalytic subunit
- UniProt
- P00789
- Pockets
- 9 · best druggability 0.62
Structure
1 distinct chain · 35% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calpain-1 catalytic subunit | protein | 705 | 35% helix, 22% strand | P00789 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 273 | 0.62 | 0.80 | 32 | empty |
| 2 | 402 | 0.59 | 0.75 | 35 | empty |
| 3 | 216 | 0.58 | 0.80 | 27 | empty |
| 4 | 326 | 0.56 | 0.76 | 30 | empty |
| 5 | 239 | 0.54 | 0.77 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00789
- Elsewhere: UniProt P00789 · AlphaFold DB P00789
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