Research workbench
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (Q12667)
Analyse AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (Q12667) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q12667
- Type
- protein
- Length
- 625 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdacb7C9769309e46da3ccf02C1e79fC50894f529
- Molecule
- Endo-1,4-beta-xylanase a
- UniProt
- Q12667
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 8% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase a | protein | 625 | 8% helix, 47% strand | Q12667 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 526 | 0.67 | 0.78 | 62 | empty |
| 2 | 93 | 0.42 | 0.78 | 16 | empty |
| 3 | 89 | 0.35 | 0.75 | 17 | empty |
| 4 | 80 | 0.30 | 0.73 | 17 | empty |
| 5 | 52 | 0.26 | 0.73 | 19 | empty |
Modifications
Observed in the structure: 10 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12667
- Elsewhere: UniProt Q12667 · AlphaFold DB Q12667
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.