Research workbench
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (P18429)
Analyse AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (P18429) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P18429
- Type
- protein
- Length
- 213 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc2C3F148eB26FE91165F4EE55FE4D2E3738B0950
- Molecule
- Endo-1,4-beta-xylanase a
- UniProt
- P18429
- Pockets
- 1 · best druggability 0.49
Structure
1 distinct chain · 5% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase a | protein | 213 | 5% helix, 57% strand | P18429 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 169 | 0.49 | 0.77 | 26 | empty |
Compared structures
- 1AXK · Engineered bacillus bifunctional enzyme gluxyn-1 · an experimental structure of the same protein · chain A against B, TM-score 0.88
- 1AXK · Engineered bacillus bifunctional enzyme gluxyn-1 · an experimental structure of the same protein · chain A against B, TM-score 0.88
- 5TVY · Computationally Designed Fentanyl Binder - Fen49 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 5TVY · Computationally designed fentanyl binder - FEN49 · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 2B46 · Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in substrate… · an experimental structure of the same protein · chain A against X, TM-score 0.86
- 2B46 · Crystal structure of an engineered uninhibited bacillus subtilis xylanase in substrate… · an experimental structure of the same protein · chain A against X, TM-score 0.86
- 2DCY · Crystal structure of Bacillus subtilis family-11 xylanase · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 2DCY · Crystal structure of bacillus subtilis family-11 xylanase · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 5K9Y · Crystal structure of a thermophilic xylanase a from bacillus subtilis 1A1 quadruple… · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 5K9Y · Crystal structure of a thermophilic xylanase A from Bacillus subtilis 1A1 quadruple… · an experimental structure of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18429
- Elsewhere: UniProt P18429 · AlphaFold DB P18429
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