Research workbench
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase 5-like (Q84WT5)
Analyse AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase 5-like (Q84WT5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q84WT5
- Type
- protein
- Length
- 570 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Endo-1,4-beta-xylanase 5-like
- UniProt
- Q84WT5
- Pockets
- 8 · best druggability 0.54
Structure
1 distinct chain · 25% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase 5-like | protein | 570 | 25% helix, 32% strand | Q84WT5 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 222 | 0.54 | 0.78 | 23 | empty |
| 2 | 244 | 0.53 | 0.76 | 33 | empty |
| 3 | 126 | 0.51 | 0.80 | 22 | empty |
| 4 | 145 | 0.50 | 0.79 | 24 | empty |
| 5 | 138 | 0.49 | 0.79 | 24 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84WT5
- Elsewhere: UniProt Q84WT5 · AlphaFold DB Q84WT5
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