Research workbench
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase 4 (Q680B7)
Analyse AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase 4 (Q680B7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q680B7
- Type
- protein
- Length
- 570 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x45c0Ec32B09adb915b7685B3d9063C89E41866C1
- Molecule
- Endo-1,4-beta-xylanase 4
- UniProt
- Q680B7
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 25% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase 4 | protein | 570 | 25% helix, 34% strand | Q680B7 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 206 | 0.72 | 0.88 | 32 | empty |
| 2 | 92 | 0.60 | 0.87 | 20 | empty |
| 3 | 233 | 0.52 | 0.76 | 36 | empty |
| 4 | 112 | 0.48 | 0.80 | 22 | empty |
| 5 | 105 | 0.48 | 0.80 | 19 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q680B7
- Elsewhere: UniProt Q680B7 · AlphaFold DB Q680B7
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