Research workbench
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase 1 (A0A1P8AWH8)
Analyse AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase 1 (A0A1P8AWH8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0A1P8AWH8
- Type
- protein
- Length
- 945 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x671C4a5236beCb236f88B9ec9861C01F9D561f42
- Molecule
- Endo-1,4-beta-xylanase 1
- Pockets
- 8 · best druggability 0.66
Structure
1 distinct chain · 17% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase 1 | protein | 945 | 17% helix, 36% strand | — |
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 548 | 0.66 | 0.77 | 61 | empty |
| 2 | 147 | 0.62 | 0.85 | 28 | empty |
| 3 | 101 | 0.58 | 0.86 | 28 | empty |
| 4 | 382 | 0.55 | 0.74 | 35 | empty |
| 5 | 199 | 0.51 | 0.77 | 35 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
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