Research workbench
AlphaFold monomer V2.0 prediction for xylosyltransferase oxt (Q5QQ53)
Analyse AlphaFold monomer V2.0 prediction for xylosyltransferase oxt (Q5QQ53) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5QQ53
- Type
- protein
- Length
- 880 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Xylosyltransferase oxt
- UniProt
- Q5QQ53
- Pockets
- 10 · best druggability 0.78
Structure
1 distinct chain · 30% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylosyltransferase oxt | protein | 880 | 30% helix, 24% strand | Q5QQ53 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 991 | 0.78 | 0.80 | 94 | empty |
| 2 | 265 | 0.57 | 0.78 | 26 | empty |
| 3 | 325 | 0.56 | 0.75 | 37 | empty |
| 4 | 161 | 0.44 | 0.75 | 27 | empty |
| 5 | 132 | 0.44 | 0.76 | 27 | empty |
Modifications
Observed in the structure: 10 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5QQ53
- Elsewhere: UniProt Q5QQ53 · AlphaFold DB Q5QQ53
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