Research workbench
AlphaFold monomer V2.0 prediction for xylosyltransferase sqv-6 (Q965Q8)
Analyse AlphaFold monomer V2.0 prediction for xylosyltransferase sqv-6 (Q965Q8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q965Q8
- Type
- protein
- Length
- 806 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Xylosyltransferase sqv-6
- UniProt
- Q965Q8
- Pockets
- 7 · best druggability 0.76
Structure
1 distinct chain · 27% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylosyltransferase sqv-6 | protein | 806 | 27% helix, 24% strand | Q965Q8 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1114 | 0.76 | 0.78 | 101 | empty |
| 2 | 430 | 0.66 | 0.79 | 29 | empty |
| 3 | 160 | 0.61 | 0.84 | 28 | empty |
| 4 | 66 | 0.49 | 0.85 | 16 | empty |
| 5 | 146 | 0.47 | 0.77 | 28 | empty |
Modifications
Observed in the structure: 11 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q965Q8
- Elsewhere: UniProt Q965Q8 · AlphaFold DB Q965Q8
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