Research workbench
AlphaFold monomer V2.0 prediction for xylosyltransferase 2 (Q5QQ50)
Analyse AlphaFold monomer V2.0 prediction for xylosyltransferase 2 (Q5QQ50) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5QQ50
- Type
- protein
- Length
- 865 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Xylosyltransferase 2
- UniProt
- Q5QQ50
- Pockets
- 8 · best druggability 0.79
Structure
1 distinct chain · 28% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylosyltransferase 2 | protein | 865 | 28% helix, 20% strand | Q5QQ50 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1006 | 0.79 | 0.81 | 90 | empty |
| 2 | 595 | 0.69 | 0.78 | 55 | empty |
| 3 | 219 | 0.48 | 0.75 | 33 | empty |
| 4 | 73 | 0.41 | 0.80 | 19 | empty |
| 5 | 108 | 0.35 | 0.74 | 21 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5QQ50
- Elsewhere: UniProt Q5QQ50 · AlphaFold DB Q5QQ50
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