Research workbench
AlphaFold monomer V2.0 prediction for xylosyltransferase 1 (Q5QQ56)
Analyse AlphaFold monomer V2.0 prediction for xylosyltransferase 1 (Q5QQ56) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5QQ56
- Type
- protein
- Length
- 950 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Xylosyltransferase 1
- UniProt
- Q5QQ56
- Pockets
- 10 · best druggability 0.77
Structure
1 distinct chain · 24% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylosyltransferase 1 | protein | 950 | 24% helix, 19% strand | Q5QQ56 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1149 | 0.77 | 0.79 | 106 | empty |
| 2 | 555 | 0.73 | 0.81 | 55 | empty |
| 3 | 97 | 0.52 | 0.83 | 16 | empty |
| 4 | 159 | 0.43 | 0.75 | 22 | empty |
| 5 | 78 | 0.40 | 0.79 | 19 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5QQ56
- Elsewhere: UniProt Q5QQ56 · AlphaFold DB Q5QQ56
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