Research workbench
AlphaFold monomer V2.0 prediction for xylooligosaccharide oxidase (G2QG48)
Analyse AlphaFold monomer V2.0 prediction for xylooligosaccharide oxidase (G2QG48) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G2QG48
- Type
- protein
- Length
- 497 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x356A98300827Dd8A16B914ED13C2114FD83b1072
- Molecule
- Xylooligosaccharide oxidase
- UniProt
- G2QG48
- Pockets
- 1 · best druggability 0.82
Structure
1 distinct chain · 35% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylooligosaccharide oxidase | protein | 497 | 35% helix, 21% strand | G2QG48 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 465 | 0.82 | 0.89 | 68 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5L6F · Xylooligosaccharide oxidase from myceliophthora thermophila C1 in complex with xylobiose · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 5L6F · Xylooligosaccharide oxidase from Myceliophthora thermophila C1 in complex with Xylobiose · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 5K8E · Xylooligosaccharide oxidase from myceliophthora thermophila C1 · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 5K8E · Xylooligosaccharide oxidase from Myceliophthora thermophila C1 · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 5L6G · Xylooligosaccharide oxidase from Myceliophthora thermophila C1 in complex with Xylose · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 5L6G · Xylooligosaccharide oxidase from myceliophthora thermophila C1 in complex with xylose · an experimental structure of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G2QG48
- Elsewhere: UniProt G2QG48 · AlphaFold DB G2QG48
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