Research workbench
AlphaFold monomer V2.0 prediction for glycosaminoglycan xylosylkinase (Q8VCS3)
Analyse AlphaFold monomer V2.0 prediction for glycosaminoglycan xylosylkinase (Q8VCS3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8VCS3
- Type
- protein
- Length
- 409 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD61E4B2Abb763e7149629bfc7B900FA271E466d5
- Molecule
- Glycosaminoglycan xylosylkinase
- UniProt
- Q8VCS3
- Pockets
- 3 · best druggability 0.66
Structure
1 distinct chain · 41% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycosaminoglycan xylosylkinase | protein | 409 | 41% helix, 15% strand | Q8VCS3 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 291 | 0.66 | 0.82 | 40 | empty |
| 2 | 344 | 0.61 | 0.78 | 42 | empty |
| 3 | 57 | 0.38 | 0.80 | 17 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VCS3
- Elsewhere: UniProt Q8VCS3 · AlphaFold DB Q8VCS3
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