Research workbench
AlphaFold monomer V2.0 prediction for glycosaminoglycan xylosylkinase (Q5RH51)
Analyse AlphaFold monomer V2.0 prediction for glycosaminoglycan xylosylkinase (Q5RH51) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5RH51
- Type
- protein
- Length
- 409 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Glycosaminoglycan xylosylkinase
- UniProt
- Q5RH51
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 40% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycosaminoglycan xylosylkinase | protein | 409 | 40% helix, 15% strand | Q5RH51 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.72 | 0.99 | 19 | empty |
| 2 | 343 | 0.69 | 0.82 | 44 | empty |
| 3 | 282 | 0.55 | 0.76 | 29 | empty |
| 4 | 72 | 0.31 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5RH51
- Elsewhere: UniProt Q5RH51 · AlphaFold DB Q5RH51
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