Research workbench

AlphaFold monomer V2.0 prediction for xylulose kinase (P09099)

Analyse AlphaFold monomer V2.0 prediction for xylulose kinase (P09099) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P09099
Type: protein
Length: 484 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xfA2D7d215A9007e461048F5227b95Ba72662019E
Molecule: Xylulose kinase
UniProt: P09099
Pockets: 3 · best druggability 0.64

Structure

1 distinct chain · 39% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Xylulose kinase	protein	484	39% helix, 22% strand	P09099

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	440	0.64	0.78	44	empty
2	191	0.47	0.75	24	empty
3	91	0.34	0.74	16	empty

Compared structures

2ITM · Crystal structure of the E. coli xylulose kinase complexed with xylulose · an experimental structure of the same protein · chain A against A, TM-score 0.96
2ITM · Crystal structure of the E. COLI xylulose kinase complexed with xylulose · an experimental structure of the same protein · chain A against A, TM-score 0.96
2NLX · Crystal structure of the apo E. COLI xylulose kinase · an experimental structure of the same protein · chain A against A, TM-score 0.96
2NLX · Crystal structure of the apo E. coli xylulose kinase · an experimental structure of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P09099
Elsewhere: UniProt P09099 · AlphaFold DB P09099

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