Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (Q1C0D3)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (Q1C0D3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1C0D3
- Type
- protein
- Length
- 439 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Xylose isomerase
- UniProt
- Q1C0D3
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 48% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 439 | 48% helix, 12% strand | Q1C0D3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 465 | 0.63 | 0.77 | 50 | empty |
| 2 | 123 | 0.39 | 0.74 | 17 | empty |
| 3 | 52 | 0.33 | 0.79 | 16 | empty |
| 4 | 50 | 0.25 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1C0D3
- Elsewhere: UniProt Q1C0D3 · AlphaFold DB Q1C0D3
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