Research workbench

AlphaFold monomer V2.0 prediction for xylose isomerase (P45687)

Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (P45687) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P45687
Type: protein
Length: 444 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
Molecule: Xylose isomerase
UniProt: P45687
Pockets: 6 · best druggability 0.74

Structure

1 distinct chain · 49% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Xylose isomerase	protein	444	49% helix, 12% strand	P45687

Pockets

6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	71	0.74	0.98	25	empty
2	367	0.61	0.77	42	empty
3	70	0.42	0.80	19	empty
4	115	0.40	0.75	18	empty
5	75	0.37	0.78	17	empty

Compared structures

1A0E · Xylose isomerase from thermotoga neapolitana · an experimental structure of the same protein · chain A against A, TM-score 0.99
1A0E · Xylose isomerase from thermotoga neapolitana · an experimental structure of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P45687
Elsewhere: UniProt P45687 · AlphaFold DB P45687

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