Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (Q9RFM4)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (Q9RFM4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9RFM4
- Type
- protein
- Length
- 395 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD9fC5c052709ba0c9A479047FBB3cdbc3D786a16
- Molecule
- Xylose isomerase
- UniProt
- Q9RFM4
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 45% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 395 | 45% helix, 11% strand | Q9RFM4 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 715 | 0.74 | 0.80 | 59 | empty |
| 2 | 100 | 0.44 | 0.79 | 20 | empty |
| 3 | 90 | 0.38 | 0.76 | 14 | empty |
| 4 | 90 | 0.34 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RFM4
- Elsewhere: UniProt Q9RFM4 · AlphaFold DB Q9RFM4
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