Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (Q3YVV0)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (Q3YVV0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3YVV0
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x98B59d43862b13d55e7D872d5Bb6D8b35CdEafa1
- Molecule
- Xylose isomerase
- UniProt
- Q3YVV0
- Pockets
- 4 · best druggability 0.70
Structure
1 distinct chain · 48% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 440 | 48% helix, 12% strand | Q3YVV0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.70 | 0.98 | 20 | empty |
| 2 | 506 | 0.64 | 0.77 | 50 | empty |
| 3 | 148 | 0.40 | 0.73 | 22 | empty |
| 4 | 69 | 0.34 | 0.77 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3YVV0
- Elsewhere: UniProt Q3YVV0 · AlphaFold DB Q3YVV0
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