Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (B5R4P8)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (B5R4P8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5R4P8
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD0b526Adb417eAE2429fFA90bDB5772CD9896317
- Molecule
- Xylose isomerase
- UniProt
- B5R4P8
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 49% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 440 | 49% helix, 12% strand | B5R4P8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 493 | 0.63 | 0.76 | 46 | empty |
| 2 | 123 | 0.38 | 0.74 | 19 | empty |
| 3 | 66 | 0.36 | 0.78 | 23 | empty |
| 4 | 62 | 0.29 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5R4P8
- Elsewhere: UniProt B5R4P8 · AlphaFold DB B5R4P8
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