Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (O08325)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (O08325) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O08325
- Type
- protein
- Length
- 445 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x525FE18ab22A16139c2eAe4837a75e46F5923bB0
- Molecule
- Xylose isomerase
- UniProt
- O08325
- Pockets
- 6 · best druggability 0.61
Structure
1 distinct chain · 48% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 445 | 48% helix, 12% strand | O08325 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 434 | 0.61 | 0.76 | 47 | empty |
| 2 | 70 | 0.59 | 0.89 | 26 | empty |
| 3 | 163 | 0.45 | 0.75 | 19 | empty |
| 4 | 84 | 0.37 | 0.77 | 17 | empty |
| 5 | 56 | 0.33 | 0.77 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O08325
- Elsewhere: UniProt O08325 · AlphaFold DB O08325
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