Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (B2JFE9)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (B2JFE9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2JFE9
- Type
- protein
- Length
- 441 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x22870ff12f53857B3832B88F106b312f71d7d767
- Molecule
- Xylose isomerase
- UniProt
- B2JFE9
- Pockets
- 5 · best druggability 0.63
Structure
1 distinct chain · 49% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 441 | 49% helix, 13% strand | B2JFE9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.63 | 0.91 | 27 | empty |
| 2 | 439 | 0.62 | 0.76 | 49 | empty |
| 3 | 51 | 0.39 | 0.81 | 17 | empty |
| 4 | 83 | 0.36 | 0.75 | 14 | empty |
| 5 | 51 | 0.24 | 0.72 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2JFE9
- Elsewhere: UniProt B2JFE9 · AlphaFold DB B2JFE9
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