Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (A3PNM4)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (A3PNM4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3PNM4
- Type
- protein
- Length
- 433 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- Xylose isomerase
- UniProt
- A3PNM4
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 48% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 433 | 48% helix, 13% strand | A3PNM4 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 137 | 0.71 | 0.91 | 30 | empty |
| 2 | 483 | 0.67 | 0.79 | 71 | empty |
| 3 | 160 | 0.44 | 0.75 | 22 | empty |
| 4 | 56 | 0.32 | 0.78 | 17 | empty |
| 5 | 61 | 0.27 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3PNM4
- Elsewhere: UniProt A3PNM4 · AlphaFold DB A3PNM4
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