Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (B1KB47)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (B1KB47) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1KB47
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF6092B45C6BBe716c5d0098E90A91B0f3f0fe4cA
- Molecule
- Xylose isomerase
- UniProt
- B1KB47
- Pockets
- 4 · best druggability 0.64
Structure
1 distinct chain · 50% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 440 | 50% helix, 13% strand | B1KB47 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 475 | 0.64 | 0.77 | 51 | empty |
| 2 | 130 | 0.41 | 0.75 | 18 | empty |
| 3 | 64 | 0.40 | 0.80 | 19 | empty |
| 4 | 51 | 0.24 | 0.72 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1KB47
- Elsewhere: UniProt B1KB47 · AlphaFold DB B1KB47
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