Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (Q89VC7)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (Q89VC7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q89VC7
- Type
- protein
- Length
- 438 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x73f87F598E2D1178c75390961C331490Aa56C856
- Molecule
- Xylose isomerase
- UniProt
- Q89VC7
- Pockets
- 4 · best druggability 0.73
Structure
1 distinct chain · 46% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 438 | 46% helix, 12% strand | Q89VC7 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 65 | 0.73 | 0.98 | 25 | empty |
| 2 | 436 | 0.61 | 0.76 | 52 | empty |
| 3 | 172 | 0.44 | 0.74 | 23 | empty |
| 4 | 54 | 0.33 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q89VC7
- Elsewhere: UniProt Q89VC7 · AlphaFold DB Q89VC7
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