Research workbench
AlphaFold monomer V2.0 prediction for xylose isomerase (B3DR33)
Analyse AlphaFold monomer V2.0 prediction for xylose isomerase (B3DR33) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3DR33
- Type
- protein
- Length
- 449 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Xylose isomerase
- UniProt
- B3DR33
- Pockets
- 5 · best druggability 0.68
Structure
1 distinct chain · 50% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 449 | 50% helix, 12% strand | B3DR33 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 105 | 0.68 | 0.91 | 31 | empty |
| 2 | 371 | 0.60 | 0.77 | 44 | empty |
| 3 | 270 | 0.54 | 0.76 | 28 | empty |
| 4 | 67 | 0.37 | 0.79 | 15 | empty |
| 5 | 54 | 0.30 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3DR33
- Elsewhere: UniProt B3DR33 · AlphaFold DB B3DR33
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