Research workbench
AlphaFold monomer V2.0 prediction for phage-like element pbsx protein xkdg (P54327)
Analyse AlphaFold monomer V2.0 prediction for phage-like element pbsx protein xkdg… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P54327
- Type
- protein
- Length
- 311 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- Phage-like element pbsx protein xkdg
- UniProt
- P54327
- Pockets
- 4 · best druggability 0.54
Structure
1 distinct chain · 36% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phage-like element pbsx protein xkdg | protein | 311 | 36% helix, 31% strand | P54327 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 224 | 0.54 | 0.77 | 26 | empty |
| 2 | 111 | 0.52 | 0.82 | 14 | empty |
| 3 | 100 | 0.35 | 0.74 | 15 | empty |
| 4 | 51 | 0.30 | 0.76 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54327
- Elsewhere: UniProt P54327 · AlphaFold DB P54327
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