Research workbench
AlphaFold monomer V2.0 prediction for xanthine dehydrogenase (Q54FB7)
Analyse AlphaFold monomer V2.0 prediction for xanthine dehydrogenase (Q54FB7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54FB7
- Type
- protein
- Length
- 1,358 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Xanthine dehydrogenase
- UniProt
- Q54FB7
- Pockets
- 13 · best druggability 0.84
Structure
1 distinct chain · 33% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xanthine dehydrogenase | protein | 1358 | 33% helix, 23% strand | Q54FB7 |
Pockets
13 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 996 | 0.84 | 0.85 | 85 | empty |
| 2 | 658 | 0.77 | 0.82 | 72 | empty |
| 3 | 332 | 0.77 | 0.87 | 67 | empty |
| 4 | 469 | 0.75 | 0.84 | 55 | empty |
| 5 | 401 | 0.74 | 0.84 | 50 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54FB7
- Elsewhere: UniProt Q54FB7 · AlphaFold DB Q54FB7
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