Research workbench
AlphaFold monomer V2.0 prediction for cell wall-associated protease (P54423)
Analyse AlphaFold monomer V2.0 prediction for cell wall-associated protease (P54423) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P54423
- Type
- protein
- Length
- 894 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Cell wall-associated protease
- UniProt
- P54423
- Pockets
- 8 · best druggability 0.88
Structure
1 distinct chain · 29% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cell wall-associated protease | protein | 894 | 29% helix, 24% strand | P54423 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1189 | 0.88 | 0.88 | 90 | empty |
| 2 | 571 | 0.71 | 0.80 | 50 | empty |
| 3 | 209 | 0.53 | 0.78 | 34 | empty |
| 4 | 68 | 0.43 | 0.82 | 17 | empty |
| 5 | 65 | 0.36 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54423
- Elsewhere: UniProt P54423 · AlphaFold DB P54423
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