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AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein WHY3, chloroplastic (Q66GR6)

Analyse AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein WHY3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q66GR6
Type: protein
Length: 268 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
Molecule: Single-stranded DNA-binding protein WHY3, chloroplastic
UniProt: Q66GR6
Pockets: 2 · best druggability 0.35

Structure

1 distinct chain · 18% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Single-stranded DNA-binding protein WHY3, chloroplastic	protein	268	18% helix, 27% strand	Q66GR6

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	84	0.35	0.75	15	empty
2	76	0.30	0.73	13	empty

Compared structures

4KOQ · Crystal Structure of WHY3 from Arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.61
4KOQ · Crystal structure of WHY3 from arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.61

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q66GR6
Elsewhere: UniProt Q66GR6 · AlphaFold DB Q66GR6

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