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AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein WHY1, chloroplastic (Q9M9S3)

Analyse AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein WHY1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9M9S3
Type: protein
Length: 263 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
Molecule: Single-stranded DNA-binding protein WHY1, chloroplastic
UniProt: Q9M9S3
Pockets: 1 · best druggability 0.41

Structure

1 distinct chain · 17% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Single-stranded DNA-binding protein WHY1, chloroplastic	protein	263	17% helix, 28% strand	Q9M9S3

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	118	0.41	0.76	21	empty

Compared structures

4KOO · Crystal Structure of WHY1 from Arabidopsis thaliana · an experimental structure of the same protein · chain A against D, TM-score 0.64
4KOO · Crystal structure of WHY1 from arabidopsis thaliana · an experimental structure of the same protein · chain A against D, TM-score 0.64

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9M9S3
Elsewhere: UniProt Q9M9S3 · AlphaFold DB Q9M9S3

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