Research workbench

AlphaFold monomer V2.0 prediction for wd repeat-containing protein 43 (Q15061)

Analyse AlphaFold monomer V2.0 prediction for wd repeat-containing protein 43 (Q15061) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q15061
Type: protein
Length: 677 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x7873A5D824374e6d396229A08164bC7953c733b0
Molecule: Wd repeat-containing protein 43
UniProt: Q15061
Pockets: 5 · best druggability 0.80

Structure

1 distinct chain · 17% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Wd repeat-containing protein 43	protein	677	17% helix, 24% strand	Q15061

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1074	0.80	0.82	82	empty
2	64	0.54	0.87	15	empty
3	55	0.43	0.83	20	empty
4	153	0.42	0.74	21	empty
5	58	0.41	0.81	16	empty

Compared structures

7MQA · Cryo-EM structure of the human SSU processome, state post-A1 · an experimental structure of the same protein · chain A against LL, TM-score 0.49
7MQ9 · Cryo-EM structure of the human SSU processome, state pre-A1* · an experimental structure of the same protein · chain A against LL, TM-score 0.49
7MQ8 · Cryo-EM structure of the human SSU processome, state pre-A1 · an experimental structure of the same protein · chain A against LL, TM-score 0.49

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q15061
Elsewhere: UniProt Q15061 · AlphaFold DB Q15061

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