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AlphaFold monomer V2.0 prediction for TRNA3(SER)-specific nuclease wapa (G4NYJ6)

Analyse AlphaFold monomer V2.0 prediction for TRNA3(SER)-specific nuclease wapa (G4NYJ6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: G4NYJ6
Type: protein
Length: 2,335 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
Molecule: TRNA3(SER)-specific nuclease wapa
UniProt: G4NYJ6
Pockets: 20 · best druggability 0.85

Structure

1 distinct chain · 5% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	TRNA3(SER)-specific nuclease wapa	protein	2335	5% helix, 44% strand	G4NYJ6

Pockets

20 pockets found on a 1 Å grid, 14 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	740	0.85	0.88	72	empty
2	185	0.83	0.97	28	empty
3	633	0.82	0.87	62	empty
4	646	0.80	0.85	70	empty
5	619	0.78	0.84	67	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G4NYJ6
Elsewhere: UniProt G4NYJ6 · AlphaFold DB G4NYJ6

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