Research workbench
AlphaFold monomer V2.0 prediction for vitronectin (P22458)
Analyse AlphaFold monomer V2.0 prediction for vitronectin (P22458) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P22458
- Type
- protein
- Length
- 475 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x30d872b97D5A8BBB2071246F96F833576bC307D1
- Molecule
- Vitronectin
- UniProt
- P22458
- Pockets
- 7 · best druggability 0.55
Structure
1 distinct chain · 14% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vitronectin | protein | 475 | 14% helix, 19% strand | P22458 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.55 | 0.89 | 19 | empty |
| 2 | 231 | 0.54 | 0.77 | 25 | empty |
| 3 | 115 | 0.50 | 0.80 | 20 | empty |
| 4 | 121 | 0.49 | 0.80 | 22 | empty |
| 5 | 141 | 0.45 | 0.76 | 23 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22458
- Elsewhere: UniProt P22458 · AlphaFold DB P22458
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