Research workbench
AlphaFold monomer V2.0 prediction for vacuolar protein sorting- associated protein VTA1 homolog (Q55B11)
Analyse AlphaFold monomer V2.0 prediction for vacuolar protein sorting- associated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q55B11
- Type
- protein
- Length
- 550 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- Vacuolar protein sorting-associated protein VTA1 homolog
- UniProt
- Q55B11
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 47% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein sorting-associated protein VTA1 homolog | protein | 550 | 47% helix, 0% strand | Q55B11 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 563 | 0.63 | 0.75 | 61 | empty |
| 2 | 429 | 0.62 | 0.76 | 37 | empty |
| 3 | 128 | 0.59 | 0.84 | 16 | empty |
| 4 | 141 | 0.46 | 0.77 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55B11
- Elsewhere: UniProt Q55B11 · AlphaFold DB Q55B11
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.