Research workbench
AlphaFold monomer V2.0 prediction for putative long chain fatty acid- CoA ligase vraa (Q6GBR2)
Analyse AlphaFold monomer V2.0 prediction for putative long chain fatty acid- CoA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6GBR2
- Type
- protein
- Length
- 458 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x119Fa0A5E210AD03E79aec1C38D138Af3E0ceB12
- Molecule
- Putative long chain fatty acid-CoA ligase vraa
- UniProt
- Q6GBR2
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 31% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative long chain fatty acid-CoA ligase vraa | protein | 458 | 31% helix, 28% strand | Q6GBR2 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1190 | 0.81 | 0.83 | 98 | empty |
| 2 | 70 | 0.60 | 0.90 | 28 | empty |
| 3 | 114 | 0.44 | 0.77 | 20 | empty |
| 4 | 66 | 0.34 | 0.77 | 16 | empty |
| 5 | 61 | 0.30 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6GBR2
- Elsewhere: UniProt Q6GBR2 · AlphaFold DB Q6GBR2
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