Research workbench
AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase VPS15 (Q9M0E5)
Analyse AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase VPS15… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9M0E5
- Type
- protein
- Length
- 1,494 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x217424F9DaBCc393943B589f669cf48C9cf3A079
- Molecule
- SERINE/THREONINE-protein kinase VPS15
- UniProt
- Q9M0E5
- Pockets
- 19 · best druggability 0.80
Structure
1 distinct chain · 32% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SERINE/THREONINE-protein kinase VPS15 | protein | 1494 | 32% helix, 17% strand | Q9M0E5 |
Pockets
19 pockets found on a 1 Å grid, 12 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 823 | 0.80 | 0.83 | 60 | empty |
| 2 | 1146 | 0.75 | 0.77 | 83 | empty |
| 3 | 405 | 0.70 | 0.82 | 38 | empty |
| 4 | 269 | 0.70 | 0.85 | 35 | empty |
| 5 | 57 | 0.69 | 0.97 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9M0E5
- Elsewhere: UniProt Q9M0E5 · AlphaFold DB Q9M0E5
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